Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB37762.1Transposase, IS605 OrfB family, central region; IMG reference gene:2506730688; PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region. (444 aa)    
Predicted Functional Partners:
AGB36296.1
Transposase, IS605 OrfB family, central region; IMG reference gene:2506729147; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.
  
     0.738
AGB38365.1
Transposase, IS605 OrfB family, central region; IMG reference gene:2506731319; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; manually curated.
  
     0.724
AGB37763.1
Hypothetical protein; IMG reference gene:2506730689; PFAM: Flavin containing amine oxidoreductase.
       0.671
AGB37764.1
Putative membrane protein; IMG reference gene:2506730690; PFAM: Predicted membrane protein (DUF2078).
       0.486
AGB37761.1
Glycerol dehydrogenase-like oxidoreductase; IMG reference gene:2506730687; PFAM: Iron-containing alcohol dehydrogenase.
       0.477
Your Current Organism:
Natronococcus occultus
NCBI taxonomy Id: 694430
Other names: N. occultus SP4, Natronococcus occultus DSM 3396, Natronococcus occultus SP4, Natronococcus occultus str. SP4, Natronococcus occultus strain SP4
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