Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AGB37763.1Hypothetical protein; IMG reference gene:2506730689; PFAM: Flavin containing amine oxidoreductase. (546 aa)    
Predicted Functional Partners:
AGB37762.1
Transposase, IS605 OrfB family, central region; IMG reference gene:2506730688; PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.
       0.671
AGB36820.1
Phytoene/squalene synthetase; IMG reference gene:2506729688; PFAM: Squalene/phytoene synthase.
  
  
 0.583
AGB37712.1
Phytoene/squalene synthetase; IMG reference gene:2506730638; PFAM: Squalene/phytoene synthase.
  
  
 0.583
AGB37764.1
Putative membrane protein; IMG reference gene:2506730690; PFAM: Predicted membrane protein (DUF2078).
       0.553
AGB37709.1
Carotene biosynthesis associated membrane protein; IMG reference gene:2506730635; PFAM: Protein of unknown function (DUF422); TIGRFAM: carotene biosynthesis associated membrane protein.
 
   
 0.535
fni
Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
 
  
 0.452
AGB36862.1
Geranylgeranyl pyrophosphate synthase; IMG reference gene:2506729731; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
 
  
 0.427
AGB37708.1
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase; IMG reference gene:2506730634; PFAM: UbiA prenyltransferase family.
  
  
 0.427
AGB37761.1
Glycerol dehydrogenase-like oxidoreductase; IMG reference gene:2506730687; PFAM: Iron-containing alcohol dehydrogenase.
       0.422
AGB38636.1
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase; IMG reference gene:2506731594; PFAM: UbiA prenyltransferase family.
 
  
 0.418
Your Current Organism:
Natronococcus occultus
NCBI taxonomy Id: 694430
Other names: N. occultus SP4, Natronococcus occultus DSM 3396, Natronococcus occultus SP4, Natronococcus occultus str. SP4, Natronococcus occultus strain SP4
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