STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB37771.1IMG reference gene:2506730697; PFAM: Universal stress protein family. (197 aa)    
Predicted Functional Partners:
AGB37797.1
Methyltransferase family protein; IMG reference gene:2506730727; PFAM: Methyltransferase domain.
  
     0.568
AGB37730.1
Hypothetical protein; IMG reference gene:2506730656.
  
     0.548
AGB38473.1
ABC-type cobalt transport system, permease component CbiQ; IMG reference gene:2506731428; PFAM: Cobalt transport protein.
 
     0.481
AGB39532.1
Hypothetical protein; IMG reference gene:2506732543; PFAM: Protein of unknown function (DUF447).
  
     0.480
AGB35914.1
Glutaredoxin-like protein; IMG reference gene:2506728748; PFAM: Glutaredoxin.
  
     0.468
AGB36695.1
Plastocyanin; IMG reference gene:2506729556; PFAM: Copper binding proteins, plastocyanin/azurin family.
  
     0.465
AGB36888.1
IMG reference gene:2506729759; PFAM: Protein of unknown function (DUF2797).
  
     0.463
AGB37772.1
IMG reference gene:2506730698; PFAM: Vitamin K-dependent gamma-carboxylase.
       0.440
AGB37769.1
Hypothetical protein; IMG reference gene:2506730695.
       0.430
AGB37770.1
Hypothetical protein; IMG reference gene:2506730696.
       0.430
Your Current Organism:
Natronococcus occultus
NCBI taxonomy Id: 694430
Other names: N. occultus SP4, Natronococcus occultus DSM 3396, Natronococcus occultus SP4, Natronococcus occultus str. SP4, Natronococcus occultus strain SP4
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.