Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB37772.1IMG reference gene:2506730698; PFAM: Vitamin K-dependent gamma-carboxylase. (529 aa)    
Predicted Functional Partners:
AGB35940.1
Hypothetical protein; IMG reference gene:2506728774.
  
     0.630
AGB37273.1
Hypothetical protein; IMG reference gene:2506730178.
  
     0.609
AGB38990.1
Putative xylanase/chitin deacetylase; IMG reference gene:2506731968; PFAM: Polysaccharide deacetylase.
  
     0.576
AGB39593.1
Putative xylanase/chitin deacetylase; IMG reference gene:2506732609; PFAM: Polysaccharide deacetylase.
  
     0.568
AGB38514.1
Hypothetical protein; IMG reference gene:2506731471.
  
     0.565
AGB38637.1
Putative xylanase/chitin deacetylase; IMG reference gene:2506731595; PFAM: Polysaccharide deacetylase.
  
     0.551
AGB39125.1
Hypothetical protein; IMG reference gene:2506732109.
  
     0.542
AGB38826.1
IMG reference gene:2506731799; PFAM: Polysaccharide deacetylase.
  
     0.532
AGB39589.1
Hypothetical protein; IMG reference gene:2506732605.
  
     0.530
AGB38521.1
Nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase CobT; IMG reference gene:2506731478; PFAM: Polysaccharide deacetylase.
  
     0.522
Your Current Organism:
Natronococcus occultus
NCBI taxonomy Id: 694430
Other names: N. occultus SP4, Natronococcus occultus DSM 3396, Natronococcus occultus SP4, Natronococcus occultus str. SP4, Natronococcus occultus strain SP4
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