STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
AGB37776.1Putative deacylase; IMG reference gene:2506730702; PFAM: Succinylglutamate desuccinylase / Aspartoacylase family. (228 aa)    
Predicted Functional Partners:
AGB37775.1
Hypothetical protein; IMG reference gene:2506730701.
       0.774
AGB39589.1
Hypothetical protein; IMG reference gene:2506732605.
  
     0.565
AGB38521.1
Nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase CobT; IMG reference gene:2506731478; PFAM: Polysaccharide deacetylase.
  
     0.561
AGB38826.1
IMG reference gene:2506731799; PFAM: Polysaccharide deacetylase.
  
     0.548
AGB37065.1
IMG reference gene:2506729950; PFAM: Polysaccharide deacetylase.
  
     0.516
AGB38687.1
IMG reference gene:2506731647; PFAM: Polysaccharide deacetylase.
  
     0.513
AGB37777.1
IMG reference gene:2506730703; PFAM: CAAX amino terminal protease family.
 
     0.473
AGB37791.1
Putative flavin-nucleotide-binding protein; IMG reference gene:2506730721; PFAM: Pyridoxamine 5'-phosphate oxidase.
  
     0.460
AGB38599.1
Hypothetical protein; IMG reference gene:2506731556.
 
     0.458
AGB39116.1
IMG reference gene:2506732100; PFAM: Polysaccharide deacetylase.
  
     0.455
Your Current Organism:
Natronococcus occultus
NCBI taxonomy Id: 694430
Other names: N. occultus SP4, Natronococcus occultus DSM 3396, Natronococcus occultus SP4, Natronococcus occultus str. SP4, Natronococcus occultus strain SP4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.