STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB37791.1Putative flavin-nucleotide-binding protein; IMG reference gene:2506730721; PFAM: Pyridoxamine 5'-phosphate oxidase. (128 aa)    
Predicted Functional Partners:
AGB39589.1
Hypothetical protein; IMG reference gene:2506732605.
  
     0.712
AGB38826.1
IMG reference gene:2506731799; PFAM: Polysaccharide deacetylase.
  
     0.708
AGB38521.1
Nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase CobT; IMG reference gene:2506731478; PFAM: Polysaccharide deacetylase.
  
     0.707
AGB37065.1
IMG reference gene:2506729950; PFAM: Polysaccharide deacetylase.
  
     0.700
AGB38687.1
IMG reference gene:2506731647; PFAM: Polysaccharide deacetylase.
  
     0.686
AGB38990.1
Putative xylanase/chitin deacetylase; IMG reference gene:2506731968; PFAM: Polysaccharide deacetylase.
  
     0.659
AGB37790.1
Glycosyl transferase; IMG reference gene:2506730720; PFAM: Glycosyl transferase family 2.
       0.616
AGB38637.1
Putative xylanase/chitin deacetylase; IMG reference gene:2506731595; PFAM: Polysaccharide deacetylase.
  
     0.613
AGB39593.1
Putative xylanase/chitin deacetylase; IMG reference gene:2506732609; PFAM: Polysaccharide deacetylase.
  
     0.600
AGB39116.1
IMG reference gene:2506732100; PFAM: Polysaccharide deacetylase.
  
     0.593
Your Current Organism:
Natronococcus occultus
NCBI taxonomy Id: 694430
Other names: N. occultus SP4, Natronococcus occultus DSM 3396, Natronococcus occultus SP4, Natronococcus occultus str. SP4, Natronococcus occultus strain SP4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.