Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB37794.1Dinuclear metal center protein, YbgI/SA1388 family; IMG reference gene:2506730724; PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family. (257 aa)    
Predicted Functional Partners:
AGB37795.1
IMG reference gene:2506730725; PFAM: Universal stress protein family.
       0.620
AGB37792.1
Deoxyhypusine synthase; IMG reference gene:2506730722; PFAM: Deoxyhypusine synthase; TIGRFAM: deoxyhypusine synthase.
   
   0.487
AGB37991.1
Hypothetical protein; IMG reference gene:2506730928.
   
   0.472
AGB38361.1
HemK-related putative methylase; IMG reference gene:2506731313; PFAM: Methyltransferase small domain; TIGRFAM: HemK-related putative methylase.
  
    0.471
AGB37682.1
L-threonine O-3-phosphate decarboxylase; IMG reference gene:2506730605; PFAM: Aminotransferase class I and II; TIGRFAM: L-threonine-O-3-phosphate decarboxylase.
  
  
 0.419
hisC
IMG reference gene:2506732319; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase.
  
  
 0.419
AGB37796.1
Heme/copper-type cytochrome/quinol oxidase, subunit 1; IMG reference gene:2506730726; PFAM: Cytochrome c oxidase subunit III; Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
       0.413
AGB37793.1
Hypothetical protein; IMG reference gene:2506730723.
       0.411
eif5a
Translation initiation factor 5A precursor (eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.
       0.411
Your Current Organism:
Natronococcus occultus
NCBI taxonomy Id: 694430
Other names: N. occultus SP4, Natronococcus occultus DSM 3396, Natronococcus occultus SP4, Natronococcus occultus str. SP4, Natronococcus occultus strain SP4
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