STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB37799.1IMG reference gene:2506730729; PFAM: Acetamidase/Formamidase family. (301 aa)    
Predicted Functional Partners:
AGB36954.1
Coenzyme F390 synthetase; IMG reference gene:2506729832; PFAM: AMP-binding enzyme.
    
  0.900
AGB37176.1
Acylphosphatase; IMG reference gene:2506730078; PFAM: Acylphosphatase.
     
  0.900
AGB36616.1
IMG reference gene:2506729475; PFAM: Aldehyde dehydrogenase family.
     
  0.650
AGB37822.1
IMG reference gene:2506730752; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
     
  0.650
AGB39058.1
IMG reference gene:2506732038; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
     
  0.650
AGB37798.1
Cold shock protein; IMG reference gene:2506730728; PFAM: 'Cold-shock' DNA-binding domain.
       0.541
AGB36343.1
IMG reference gene:2506729196; PFAM: Acetamidase/Formamidase family.
  
     0.425
Your Current Organism:
Natronococcus occultus
NCBI taxonomy Id: 694430
Other names: N. occultus SP4, Natronococcus occultus DSM 3396, Natronococcus occultus SP4, Natronococcus occultus str. SP4, Natronococcus occultus strain SP4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.