Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB37801.1Agmatinase; IMG reference gene:2506730731; PFAM: Arginase family; TIGRFAM: agmatinase; Belongs to the arginase family. (283 aa)    
Predicted Functional Partners:
AGB38232.1
Hypothetical protein; IMG reference gene:2506731174; PFAM: Pyruvoyl-dependent arginine decarboxylase (PvlArgDC); TIGRFAM: arginine decarboxylase, pyruvoyl-dependent.
    
 0.924
eif5a
Translation initiation factor 5A precursor (eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.
  
  
 0.859
AGB39169.1
Arginase; IMG reference gene:2506732155; PFAM: Arginase family; TIGRFAM: arginase; Belongs to the arginase family.
  
     0.657
hutH
Histidine ammonia-lyase; IMG reference gene:2506731944; PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase.
 
  
 0.642
AGB37739.1
Spermidine synthase; IMG reference gene:2506730665; PFAM: Spermine/spermidine synthase.
  
  
 0.599
AGB37800.1
Hypothetical protein; IMG reference gene:2506730730.
       0.571
AGB37773.1
NADH:flavin oxidoreductase; IMG reference gene:2506730699; PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family.
  
 
 0.549
AGB36031.1
IMG reference gene:2506728867; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.536
AGB37803.1
Hypothetical protein; IMG reference gene:2506730733.
       0.527
AGB37970.1
Citrate synthase; IMG reference gene:2506730906; PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II.
  
 
 0.515
Your Current Organism:
Natronococcus occultus
NCBI taxonomy Id: 694430
Other names: N. occultus SP4, Natronococcus occultus DSM 3396, Natronococcus occultus SP4, Natronococcus occultus str. SP4, Natronococcus occultus strain SP4
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