STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB37877.1IMG reference gene:2506730807; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit. (711 aa)    
Predicted Functional Partners:
AGB37882.1
Putative component of anaerobic dehydrogenase; IMG reference gene:2506730812; PFAM: Nitrate reductase delta subunit.
 
     0.820
AGB37879.1
Anaerobic dehydrogenase, typically selenocysteine-containing; IMG reference gene:2506730809; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain.
 
     0.614
AGB39053.1
Putative anaerobic dehydrogenase; IMG reference gene:2506732033; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain.
 
     0.611
AGB36588.1
3-polyprenyl-4-hydroxybenzoate decarboxylase-like protein; IMG reference gene:2506729445; PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases.
  
     0.592
AGB39052.1
Fe-S-cluster-containing hydrogenase subunit; IMG reference gene:2506732032.
 
     0.540
AGB37880.1
Fe-S-cluster-containing hydrogenase subunit; IMG reference gene:2506730810.
 
     0.524
AGB39119.1
IMG reference gene:2506732103; PFAM: HTH DNA binding domain.
  
     0.514
AGB37183.1
ABC-type tungstate transport system, permease component; IMG reference gene:2506730085.
  
     0.506
AGB37182.1
ABC-type tungstate transport system, periplasmic component; IMG reference gene:2506730084; PFAM: Binding-protein-dependent transport system inner membrane component.
  
     0.500
AGB36459.1
IMG reference gene:2506729315; PFAM: HTH DNA binding domain.
  
     0.477
Your Current Organism:
Natronococcus occultus
NCBI taxonomy Id: 694430
Other names: N. occultus SP4, Natronococcus occultus DSM 3396, Natronococcus occultus SP4, Natronococcus occultus str. SP4, Natronococcus occultus strain SP4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.