STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB37920.1Hypothetical protein; IMG reference gene:2506730852; PFAM: YqcI/YcgG family. (265 aa)    
Predicted Functional Partners:
AGB37921.1
Nicotinamidase-like amidase; IMG reference gene:2506730853; PFAM: Isochorismatase family.
 
     0.907
AGB38308.1
Hypothetical protein; IMG reference gene:2506731259.
  
     0.618
AGB37919.1
Hypothetical protein; IMG reference gene:2506730851; PFAM: Uncharacterized conserved protein (COG2071).
 
     0.592
AGB38103.1
Archaeal flagella assembly protein J; IMG reference gene:2506731043; PFAM: Bacterial type II secretion system protein F domain.
  
     0.589
AGB38112.1
Archaeal flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
     0.587
AGB38105.1
Putative ATPase involved in flagella biogenesis; IMG reference gene:2506731045; PFAM: KaiC.
  
     0.586
AGB38111.1
Archaeal flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
     0.568
AGB38410.1
Hypothetical protein; IMG reference gene:2506731364.
  
     0.565
AGB38109.1
Archaeal flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
     0.553
AGB38110.1
Archaeal flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
     0.551
Your Current Organism:
Natronococcus occultus
NCBI taxonomy Id: 694430
Other names: N. occultus SP4, Natronococcus occultus DSM 3396, Natronococcus occultus SP4, Natronococcus occultus str. SP4, Natronococcus occultus strain SP4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.