STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB37923.1Flavin-dependent dehydrogenase; IMG reference gene:2506730855; PFAM: Lycopene cyclase protein; TIGRFAM: geranylgeranyl reductase family. (414 aa)    
Predicted Functional Partners:
AGB37105.1
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids.
 
 
 0.954
AGB36909.1
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids.
 
 
 0.952
carS
CDP-diglyceride synthetase; Catalyzes the formation of CDP-2,3-bis-(O-geranylgeranyl)-sn- glycerol (CDP-archaeol) from 2,3-bis-(O-geranylgeranyl)-sn-glycerol 1- phosphate (DGGGP) and CTP. This reaction is the third ether-bond- formation step in the biosynthesis of archaeal membrane lipids.
  
  
 0.947
AGB36559.1
Geranylgeranyl reductase family protein; IMG reference gene:2506729415; PFAM: Tryptophan halogenase; FAD binding domain; TIGRFAM: geranylgeranyl reductase family.
  
  
 
0.930
AGB38139.1
Geranylgeranyl reductase family protein; IMG reference gene:2506731079; PFAM: FAD binding domain; TIGRFAM: geranylgeranyl reductase family.
  
   
 0.729
AGB37922.1
Putative divalent heavy-metal cations transporter; IMG reference gene:2506730854; PFAM: ZIP Zinc transporter.
  
    0.680
AGB39538.1
IMG reference gene:2506732549; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
  
     0.605
AGB37217.1
Electron transfer flavoprotein, beta subunit; IMG reference gene:2506730121; PFAM: Electron transfer flavoprotein domain.
 
 
 0.565
AGB36445.1
Phytoene dehydrogenase-like oxidoreductase; IMG reference gene:2506729300; PFAM: Flavin containing amine oxidoreductase.
 
  
 0.529
AGB37712.1
Phytoene/squalene synthetase; IMG reference gene:2506730638; PFAM: Squalene/phytoene synthase.
 
  
 0.528
Your Current Organism:
Natronococcus occultus
NCBI taxonomy Id: 694430
Other names: N. occultus SP4, Natronococcus occultus DSM 3396, Natronococcus occultus SP4, Natronococcus occultus str. SP4, Natronococcus occultus strain SP4
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.