STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB37980.1Transcriptional regulator; IMG reference gene:2506730917; PFAM: Bacterial regulatory protein, arsR family; AsnC family. (153 aa)    
Predicted Functional Partners:
AGB38488.1
Transcriptional regulator; IMG reference gene:2506731445.
  
   
 0.689
AGB36054.1
Transcriptional regulator; IMG reference gene:2506728891; PFAM: HTH domain.
  
     0.652
AGB37589.1
Transcriptional regulator; IMG reference gene:2506730507; PFAM: Iron dependent repressor, N-terminal DNA binding domain; TrkA-C domain.
  
  
 0.648
AGB36632.1
Transcriptional regulator; IMG reference gene:2506729491; PFAM: AsnC family.
  
   
 0.596
AGB37981.1
PAP2 family phosphatase; IMG reference gene:2506730918; PFAM: PAP2 superfamily.
       0.473
AGB37524.1
Transcriptional regulator; IMG reference gene:2506730436; PFAM: IclR helix-turn-helix domain; AsnC family.
  
   
 0.459
AGB38444.1
Transcriptional regulator; IMG reference gene:2506731398; PFAM: HTH domain; TrkA-C domain.
  
  
 0.442
Your Current Organism:
Natronococcus occultus
NCBI taxonomy Id: 694430
Other names: N. occultus SP4, Natronococcus occultus DSM 3396, Natronococcus occultus SP4, Natronococcus occultus str. SP4, Natronococcus occultus strain SP4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.