STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB38191.1Hypothetical protein; IMG reference gene:2506731132; PFAM: Uncharacterised protein family (UPF0146); Belongs to the UPF0146 family. (146 aa)    
Predicted Functional Partners:
AGB38192.1
Hypothetical protein; IMG reference gene:2506731133.
       0.774
AGB36982.1
Archaeal flagella assembly protein J; IMG reference gene:2506729860; PFAM: Bacterial type II secretion system protein F domain.
  
     0.712
AGB37911.1
ACT-domain-containing protein, predicted allosteric regulator of homoserine dehydrogenase; IMG reference gene:2506730843.
  
     0.708
AGB38193.1
IMG reference gene:2506731134; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548.
       0.686
AGB39532.1
Hypothetical protein; IMG reference gene:2506732543; PFAM: Protein of unknown function (DUF447).
  
     0.685
AGB38027.1
Putative metal-binding protein; IMG reference gene:2506730965.
  
     0.674
AGB39731.1
Hypothetical protein; IMG reference gene:2506732749; PFAM: Kinase binding protein CGI-121.
  
     0.638
AGB38644.1
Hypothetical protein; IMG reference gene:2506731602.
  
     0.634
amzA
Putative Zn-dependent protease; Probable zinc metalloprotease whose natural substrate is unknown.
       0.623
AGB38345.1
Putative Zn-ribbon RNA-binding protein with a function in translation; IMG reference gene:2506731297; PFAM: Domain of unknown function (DUF1610).
  
     0.621
Your Current Organism:
Natronococcus occultus
NCBI taxonomy Id: 694430
Other names: N. occultus SP4, Natronococcus occultus DSM 3396, Natronococcus occultus SP4, Natronococcus occultus str. SP4, Natronococcus occultus strain SP4
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.