STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB38570.1ABC-type spermidine/putrescine transport system, permease component II; IMG reference gene:2506731527; PFAM: Binding-protein-dependent transport system inner membrane component. (272 aa)    
Predicted Functional Partners:
AGB38569.1
ABC-type spermidine/putrescine transport system, permease component I; IMG reference gene:2506731526; PFAM: Binding-protein-dependent transport system inner membrane component.
 0.999
AGB38568.1
ABC-type spermidine/putrescine transport system, ATPase component; IMG reference gene:2506731525; PFAM: ABC transporter; TOBE domain.
 
 
 0.985
AGB38567.1
Spermidine/putrescine-binding periplasmic protein; IMG reference gene:2506731524.
 
  
 0.941
AGB37377.1
ABC-type spermidine/putrescine transport system, ATPase component; IMG reference gene:2506730286; PFAM: ABC transporter; TOBE domain.
 
  
 0.710
AGB38539.1
ABC-type spermidine/putrescine transport system, ATPase component; IMG reference gene:2506731496; PFAM: ABC transporter; TOBE domain.
 
  
 0.703
AGB36877.1
ABC-type spermidine/putrescine transport system, ATPase component; IMG reference gene:2506729748; PFAM: ABC transporter; TOBE domain.
 
  
 0.611
AGB38376.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; IMG reference gene:2506731330; PFAM: ABC transporter.
 
  
 0.570
AGB38901.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; IMG reference gene:2506731877; PFAM: ABC transporter.
 
  
 0.560
AGB37539.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; IMG reference gene:2506730451; PFAM: ABC transporter; TOBE domain.
 
  
 0.559
AGB37092.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; IMG reference gene:2506729980; PFAM: ABC transporter; TOBE domain.
 
  
 0.553
Your Current Organism:
Natronococcus occultus
NCBI taxonomy Id: 694430
Other names: N. occultus SP4, Natronococcus occultus DSM 3396, Natronococcus occultus SP4, Natronococcus occultus str. SP4, Natronococcus occultus strain SP4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.