Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB39320.1Nitrate/nitrite transporter; IMG reference gene:2506732318; PFAM: Major Facilitator Superfamily. (445 aa)    
Predicted Functional Partners:
AGB36835.1
Hypothetical protein; IMG reference gene:2506729703.
 
 
 0.984
AGB36834.1
Nitrate reductase alpha subunit; IMG reference gene:2506729702; PFAM: Molybdopterin oxidoreductase.
 
 
 0.980
AGB38670.1
Putative anaerobic dehydrogenase; IMG reference gene:2506731630; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; manually curated.
 
 
 0.935
AGB38531.1
Sulfite reductase, beta subunit (hemoprotein); IMG reference gene:2506731488; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain.
 
  
 0.928
AGB38667.1
Nitrate/nitrite transporter; IMG reference gene:2506731627; PFAM: Major Facilitator Superfamily.
  
  
 
0.928
AGB35994.1
Sulfite reductase, beta subunit (hemoprotein); IMG reference gene:2506728829; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain.
 
  
 0.927
AGB39605.1
Sulfite reductase, beta subunit (hemoprotein); IMG reference gene:2506732621; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain.
 
  
 0.927
AGB39483.1
Nitrate/nitrite transporter; IMG reference gene:2506732487; PFAM: Major Facilitator Superfamily.
  
  
 
0.906
AGB36609.1
Formate dehydrogenase, alpha subunit, archaeal-type; IMG reference gene:2506729468; PFAM: Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type.
 
  
 0.620
AGB39681.1
Ammonia permease; IMG reference gene:2506732699; PFAM: Ammonium Transporter Family; Nitrogen regulatory protein P-II; TIGRFAM: ammonium transporter; Belongs to the P(II) protein family.
  
  
 0.544
Your Current Organism:
Natronococcus occultus
NCBI taxonomy Id: 694430
Other names: N. occultus SP4, Natronococcus occultus DSM 3396, Natronococcus occultus SP4, Natronococcus occultus str. SP4, Natronococcus occultus strain SP4
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