STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB39465.1Putative transporter component; IMG reference gene:2506732468; PFAM: YeeE/YedE family (DUF395). (185 aa)    
Predicted Functional Partners:
AGB39464.1
Putative transporter component; IMG reference gene:2506732467; PFAM: YeeE/YedE family (DUF395).
 
     0.894
AGB39402.1
Putative transporter component; IMG reference gene:2506732403; PFAM: YeeE/YedE family (DUF395).
 
     0.777
AGB39466.1
IMG reference gene:2506732469; PFAM: Succinylglutamate desuccinylase / Aspartoacylase family.
 
     0.604
AGB39399.1
Putative redox protein, regulator of disulfide bond formation; IMG reference gene:2506732400; PFAM: SirA-like protein.
  
  
 0.501
AGB39463.1
Glutaredoxin-related protein; IMG reference gene:2506732466; PFAM: Glutaredoxin; TIGRFAM: monothiol glutaredoxin, Grx4 family.
 
     0.496
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
 
    0.480
Your Current Organism:
Natronococcus occultus
NCBI taxonomy Id: 694430
Other names: N. occultus SP4, Natronococcus occultus DSM 3396, Natronococcus occultus SP4, Natronococcus occultus str. SP4, Natronococcus occultus strain SP4
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