STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7P4V7_IXOSCGTP-binding protein RAB-32, putative. (228 aa)    
Predicted Functional Partners:
B7QIZ6_IXOSC
Rab proteins geranylgeranyltransferase component A, putative.
    
 0.682
B7PIZ1_IXOSC
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.647
B7PXG2_IXOSC
Glycoprotein gC1qBP, putative.
      
 0.564
B7QGJ2_IXOSC
Uncharacterized protein.
    
 
 0.538
B7QLI1_IXOSC
Vacuolar sorting protein, putative (Fragment).
      
 0.536
B7P1S2_IXOSC
RAB geranylgeranyl transferase alpha subunit, putative (Fragment).
    
 0.527
B7PRX3_IXOSC
RAB geranylgeranyl transferase alpha subunit, putative.
    
 0.527
B7PBJ4_IXOSC
Uncharacterized protein.
     
 0.515
B7P5Y3_IXOSC
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
      
 0.481
B7PL79_IXOSC
RAB geranylgeranyl transferase alpha subunit, putative.
    
 0.441
Your Current Organism:
Ixodes scapularis
NCBI taxonomy Id: 6945
Other names: I. scapularis, Ixodes dammini, Ixodes sp. DNAS-303-249710, black-legged tick, blacklegged tick, deer tick, shoulder tick
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