STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7P4V9_IXOSCSplicing factor SPF30, putative. (296 aa)    
Predicted Functional Partners:
B7QEV8_IXOSC
Pre-mRNA splicing factor, putative.
    
 
 0.918
B7P4G8_IXOSC
U2 small nuclear ribonucleoprotein A, putative.
     
 0.855
B7Q0R9_IXOSC
ATP-dependent RNA helicase, putative (Fragment).
   
 
 0.838
B7PHP4_IXOSC
Uncharacterized protein.
     
 0.833
B7PZV0_IXOSC
Splicing factor 3B subunit, putative (Fragment).
   
 0.815
B7PLF8_IXOSC
DNA-damage-repair/toleration protein DRT111, putative (Fragment).
   
 
  0.793
B7PED4_IXOSC
U2associated protein SR140, putative.
    
  0.777
B7PXI3_IXOSC
Spliceosomal protein sap, putative (Fragment).
  
 
 0.769
B7PYZ7_IXOSC
U2 small nuclear ribonucleoprotein A, putative.
     
 0.735
B7P3E8_IXOSC
RRM domain-containing protein.
    
 0.732
Your Current Organism:
Ixodes scapularis
NCBI taxonomy Id: 6945
Other names: I. scapularis, Ixodes dammini, Ixodes sp. DNAS-303-249710, black-legged tick, blacklegged tick, deer tick, shoulder tick
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.