STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7P865_IXOSCDNA repair endonuclease xp-f / mei-9 / rad1, putative. (775 aa)    
Predicted Functional Partners:
B7QC65_IXOSC
Excision repair cross-complementing 1 ercc1, putative.
   
 0.999
B7Q5Q8_IXOSC
Xpacxe2 protein, putative (Fragment).
    
 0.989
B7QGL8_IXOSC
Rad25/xp-B DNA repair helicase, putative.
  
 0.952
B7P548_IXOSC
ERCC4 domain-containing protein.
    
 0.940
B7PJJ6_IXOSC
BTB domain-containing protein.
  
 0.906
B7PMU3_IXOSC
DNA-repair protein xp-G, putative (Fragment).
   
 0.906
B7QIG4_IXOSC
Asparaginyl-tRNA synthetase, putative.
  
 0.906
B7P430_IXOSC
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.
   
 0.895
B7P2J8_IXOSC
DNA repair helicase rad3/xp-D, putative.
   
 0.881
B7PFF9_IXOSC
DNA repair protein xp-C / rad4, putative (Fragment).
    
 0.863
Your Current Organism:
Ixodes scapularis
NCBI taxonomy Id: 6945
Other names: I. scapularis, Ixodes dammini, Ixodes sp. DNAS-303-249710, black-legged tick, blacklegged tick, deer tick, shoulder tick
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.