STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7P9S2_IXOSCRNA binding motif protein, putative. (597 aa)    
Predicted Functional Partners:
B7PKP1_IXOSC
Ribosome biogenesis protein bms1, putative.
   
 
 0.996
B7P1J3_IXOSC
WD-repeat protein, putative.
   
 
 0.993
B7P251_IXOSC
U3 small nucleolar ribonucleoprotein imp4, putative.
   
   0.988
ISCW009002
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
  
 0.983
B7P3V3_IXOSC
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
   0.981
B7PSI3_IXOSC
WD-repeat protein, putative.
   
    0.981
B7Q0J4_IXOSC
DEAD box ATP-dependent RNA helicase, putative.
   
   0.980
B7PZE2_IXOSC
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
  
 0.979
B7PTB3_IXOSC
GTP-binding protein, putative (Fragment).
   
  
 0.977
B7PEL1_IXOSC
DEAD box ATP-dependent RNA helicase, putative.
   
 
 0.976
Your Current Organism:
Ixodes scapularis
NCBI taxonomy Id: 6945
Other names: I. scapularis, Ixodes dammini, Ixodes sp. DNAS-303-249710, black-legged tick, blacklegged tick, deer tick, shoulder tick
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.