STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7PB44_IXOSCDNA2/nam7 helicase, putative. (1489 aa)    
Predicted Functional Partners:
B7QIT4_IXOSC
Pre-mRNA splicing factor Syf1, putative.
   
 0.997
B7P5B3_IXOSC
U5 snRNP-specific protein, putative (Fragment).
   
 
 0.991
B7Q836_IXOSC
Crooked neck protein, putative.
    
 0.989
B7QH38_IXOSC
Myb transforming protein, putative.
   
 
 0.989
B7QB61_IXOSC
Pre-mRNA splicing factor Prp8, putative.
   
 
 0.985
B7Q6X8_IXOSC
RNA-binding protein, putative.
    
 0.982
B7PSM0_IXOSC
mRNA splicing factor, putative (Fragment).
   
 
 0.980
B7P3U9_IXOSC
Uncharacterized protein.
 
  
 0.977
B7PRK3_IXOSC
G10 protein/nuclear transcription regulator, putative (Fragment).
    
  0.976
B7PA38_IXOSC
Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.
    
 0.973
Your Current Organism:
Ixodes scapularis
NCBI taxonomy Id: 6945
Other names: I. scapularis, Ixodes dammini, Ixodes sp. DNAS-303-249710, black-legged tick, blacklegged tick, deer tick, shoulder tick
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