STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7PGJ7_IXOSCSecreted glycine rich cement protein, putative. (516 aa)    
Predicted Functional Partners:
B7PE24_IXOSC
DNA-directed RNA polymerase subunit E', putative (Fragment).
    
 0.783
B7PRG9_IXOSC
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.783
B7PRL4_IXOSC
RNA polymerase subunit K, putative.
    
 0.783
B7PS85_IXOSC
RNA polymerases L, putative.
    
 0.783
B7Q5X9_IXOSC
RNA polymerase, 25-kDa subunit, putative.
    
 0.783
B7Q9V8_IXOSC
DNA-directed RNA polymerase subunit rpb8, putative.
    
 0.783
B7QE03_IXOSC
DNA-directed RNA polymerase II, putative.
    
 0.783
B7QL52_IXOSC
RNA polymerases I, II and III shared polypeptide, putative.
    
 0.783
B7QL55_IXOSC
RNA polymerase II, subunit POLR2C/RPB3, putative.
    
 0.783
B7Q4L6_IXOSC
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.781
Your Current Organism:
Ixodes scapularis
NCBI taxonomy Id: 6945
Other names: I. scapularis, Ixodes dammini, Ixodes sp. DNAS-303-249710, black-legged tick, blacklegged tick, deer tick, shoulder tick
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.