STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7PL00_IXOSCAntiviral helicase Slh1, putative. (2143 aa)    
Predicted Functional Partners:
B7QB61_IXOSC
Pre-mRNA splicing factor Prp8, putative.
   
 0.999
B7P5B3_IXOSC
U5 snRNP-specific protein, putative (Fragment).
   
 0.998
B7QEV8_IXOSC
Pre-mRNA splicing factor, putative.
   
 0.998
B7PXI3_IXOSC
Spliceosomal protein sap, putative (Fragment).
   
 
 0.996
B7QLK2_IXOSC
mRNA splicing factor, putative.
   
 0.995
B7PPV3_IXOSC
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
    
 0.994
B7PSA5_IXOSC
Hypoxia-associated factor, putative (Fragment).
   
 0.994
B7Q665_IXOSC
U4/u6 small nuclear ribonucleoprotein, putative.
    
 0.994
B7QFR1_IXOSC
U4/U6 small nuclear ribonucleoprotein Prp31, putative.
    
 0.994
B7QJT1_IXOSC
U4/U6 small nuclear ribonucleoprotein Prp4, putative (Fragment).
   
 0.994
Your Current Organism:
Ixodes scapularis
NCBI taxonomy Id: 6945
Other names: I. scapularis, Ixodes dammini, Ixodes sp. DNAS-303-249710, black-legged tick, blacklegged tick, deer tick, shoulder tick
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