STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7PQ21_IXOSCDEAD box ATP-dependent RNA helicase, putative (Fragment); Belongs to the DEAD box helicase family. (494 aa)    
Predicted Functional Partners:
B7P5B3_IXOSC
U5 snRNP-specific protein, putative (Fragment).
   
 0.861
B7QEV8_IXOSC
Pre-mRNA splicing factor, putative.
    
 0.856
B7QH38_IXOSC
Myb transforming protein, putative.
    
 0.806
B7Q942_IXOSC
Translation initiation factor 4F, cap-binding subunit, putative; Belongs to the eukaryotic initiation factor 4E family.
    
 0.786
B7QF29_IXOSC
Ribosomal DEAD box protein, putative (Fragment); Belongs to the DEAD box helicase family.
  
0.706
B7P0N4_IXOSC
ATP synthase D chain, putative.
   
   0.689
B7QI53_IXOSC
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.670
B7QL68_IXOSC
Eukaryotic translation initiation factor, putative.
   
 0.661
B7PHW1_IXOSC
ATP synthase H+ transporting, F1 complex, delta subunit precursor, putative.
  
 
 0.655
B7QAW9_IXOSC
ATP synthase B chain, putative.
   
 
 0.630
Your Current Organism:
Ixodes scapularis
NCBI taxonomy Id: 6945
Other names: I. scapularis, Ixodes dammini, Ixodes sp. DNAS-303-249710, black-legged tick, blacklegged tick, deer tick, shoulder tick
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.