STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7PVG1_IXOSCUbiquitin-conjugating enzyme, putative. (108 aa)    
Predicted Functional Partners:
B7P0U0_IXOSC
40S ribosomal protein S27A, putative.
    
 0.877
Q4PM08_IXOSC
Ribosomal protein L40, putative.
    
 0.822
B7PKK7_IXOSC
Ubiquitin protein ligase, putative; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.574
B7PKN3_IXOSC
Ubiquitin protein ligase; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.574
B7Q0Y2_IXOSC
Ubiquitin protein ligase, putative; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.574
B7Q149_IXOSC
Ubiquitin-conjugating enzyme, putative (Fragment).
    
 0.574
B7Q173_IXOSC
Ubiquitin protein ligase, putative (Fragment); Belongs to the ubiquitin-conjugating enzyme family.
    
 0.574
B7QEU8_IXOSC
Ubiquitin protein ligase, putative (Fragment); Belongs to the ubiquitin-conjugating enzyme family.
    
 0.574
B7PP20_IXOSC
Ubiquitin-conjugating enzyme, putative.
    
  0.543
B7QH24_IXOSC
Ubiquitin protein ligase, putative; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.512
Your Current Organism:
Ixodes scapularis
NCBI taxonomy Id: 6945
Other names: I. scapularis, Ixodes dammini, Ixodes sp. DNAS-303-249710, black-legged tick, blacklegged tick, deer tick, shoulder tick
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.