STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7Q0F4_IXOSCCoiled-coil domain-containing protein, putative. (298 aa)    
Predicted Functional Partners:
B7P3E8_IXOSC
RRM domain-containing protein.
    
 
 0.868
B7QIF0_IXOSC
Pre-mRNA splicing factor SF3B 10 kDa subunit, putative.
    
 
 0.843
B7PZV0_IXOSC
Splicing factor 3B subunit, putative (Fragment).
    
 
 0.766
B7PXI3_IXOSC
Spliceosomal protein sap, putative (Fragment).
    
 
 0.745
B7QLI1_IXOSC
Vacuolar sorting protein, putative (Fragment).
 
      0.733
B7P952_IXOSC
Splicing factor 3A subunit, putative.
   
 
 0.666
B7QNN9_IXOSC
Uncharacterized protein.
   
 
 0.634
B7Q6R7_IXOSC
Spliceosome associated protein, putative.
    
 
 0.604
B7PED4_IXOSC
U2associated protein SR140, putative.
    
 
 0.600
B7PHL5_IXOSC
RNA polymerase II ctd phosphatase, putative (Fragment).
      
 0.545
Your Current Organism:
Ixodes scapularis
NCBI taxonomy Id: 6945
Other names: I. scapularis, Ixodes dammini, Ixodes sp. DNAS-303-249710, black-legged tick, blacklegged tick, deer tick, shoulder tick
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.