STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7Q4N0_IXOSCCargo transport protein EMP24, putative. (280 aa)    
Predicted Functional Partners:
B7P427_IXOSC
Transmembrane protein Tmp21, putative.
   
 
 0.649
B7QAD2_IXOSC
Uncharacterized protein.
   
  
 0.633
B7P5I7_IXOSC
Uncharacterized protein.
      
 0.632
B7P0U3_IXOSC
Tetratricopeptide repeat protein, tpr, putative.
      
 0.630
B7P8X0_IXOSC
Ubiquitin-fold modifier 1; Ubiquitin-like modifier.
      
 0.630
B7QDL3_IXOSC
TraB domain-containing protein, putative.
      
 0.626
B7P3E7_IXOSC
Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.
      
 0.592
B7PD34_IXOSC
Nt_Gln_amidase domain-containing protein.
      
 0.583
B7PU75_IXOSC
MPN domain-containing protein, putative.
      
 0.572
B7P454_IXOSC
Cargo transport protein EMP24, putative.
   
 
0.553
Your Current Organism:
Ixodes scapularis
NCBI taxonomy Id: 6945
Other names: I. scapularis, Ixodes dammini, Ixodes sp. DNAS-303-249710, black-legged tick, blacklegged tick, deer tick, shoulder tick
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