STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7QGS3_IXOSCUncharacterized protein. (356 aa)    
Predicted Functional Partners:
B7PTI1_IXOSC
Small nuclear ribonucleoprotein G.
   
 0.996
B7Q5F5_IXOSC
Small nuclear ribonucleoprotein Sm D2.
   
 0.993
B7PWB9_IXOSC
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.990
B7Q5H5_IXOSC
Small nuclear ribonucleoprotein Sm D3.
   
 0.988
B7PHP4_IXOSC
Uncharacterized protein.
   
 0.972
B7P4G8_IXOSC
U2 small nuclear ribonucleoprotein A, putative.
   
 0.963
B7P5B3_IXOSC
U5 snRNP-specific protein, putative (Fragment).
   
 0.960
B7Q058_IXOSC
Membrane-associated protein, putative.
   
 0.960
B7QEK0_IXOSC
Membrane-associated protein, putative; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.960
B7PRX9_IXOSC
Small nuclear ribonucleoprotein-associated protein.
   
 0.959
Your Current Organism:
Ixodes scapularis
NCBI taxonomy Id: 6945
Other names: I. scapularis, Ixodes dammini, Ixodes sp. DNAS-303-249710, black-legged tick, blacklegged tick, deer tick, shoulder tick
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.