STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7QH68_IXOSCAnkyrin repeat-containing protein (Fragment). (248 aa)    
Predicted Functional Partners:
B7PUJ5_IXOSC
Vesicle coat complex COPII, subunit SEC13, putative; Belongs to the WD repeat SEC13 family.
    
 0.961
B7P481_IXOSC
Protein transport protein Sec24A, putative.
   
 0.953
B7PDY5_IXOSC
Vesicle coat complex COPII, GTPase subunit SAR1, putative; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.940
B7PBS7_IXOSC
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.889
B7PZS8_IXOSC
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.889
B7Q643_IXOSC
Uncharacterized protein.
   
 0.885
B7P3J7_IXOSC
Synaptobrevin 1-2, putative; Belongs to the synaptobrevin family.
    
 0.793
B7QH45_IXOSC
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
     
 0.787
B7P364_IXOSC
Mannose-binding endoplasmic reticulum-golgi intermediate compartment lectin.
   
 
 0.754
B7P3A1_IXOSC
SNARE domaincontaining protein.
     
 0.744
Your Current Organism:
Ixodes scapularis
NCBI taxonomy Id: 6945
Other names: I. scapularis, Ixodes dammini, Ixodes sp. DNAS-303-249710, black-legged tick, blacklegged tick, deer tick, shoulder tick
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.