STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7QHV3_IXOSCCytoplasmic polyadenylation element binding protein, putative. (327 aa)    
Predicted Functional Partners:
B7QNX7_IXOSC
Poly(A) polymerase, putative.
   
 
 0.808
B7QNR2_IXOSC
Symplekin, putative.
    
 
 0.795
B7QF29_IXOSC
Ribosomal DEAD box protein, putative (Fragment); Belongs to the DEAD box helicase family.
   
 
 0.743
B7PFD0_IXOSC
Staufen, putative (Fragment).
     
 0.713
B7QKX3_IXOSC
Cell division cycle regulator protein, putative.
 
    
 0.703
B7Q2V7_IXOSC
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 
 0.684
B7PXJ3_IXOSC
Cytoplasmic polyadenylation element binding protein, putative (Fragment).
  
0.665
B7PS70_IXOSC
Uncharacterized protein.
    
 
 0.633
B7Q4N6_IXOSC
Uncharacterized protein.
   
 
 0.615
B7Q942_IXOSC
Translation initiation factor 4F, cap-binding subunit, putative; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.606
Your Current Organism:
Ixodes scapularis
NCBI taxonomy Id: 6945
Other names: I. scapularis, Ixodes dammini, Ixodes sp. DNAS-303-249710, black-legged tick, blacklegged tick, deer tick, shoulder tick
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