STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7QIS1_IXOSCProcollagen-lysine, 2-oxoglutarate 5-dioxygenase, putative. (322 aa)    
Predicted Functional Partners:
B7PVV2_IXOSC
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase, putative (Fragment).
   
 0.955
B7QAK2_IXOSC
GLT25D1 protein, putative.
 
      0.900
B7QD29_IXOSC
Cullin, putative; Belongs to the cullin family.
 
   
  0.681
B7PZ75_IXOSC
Uncharacterized protein.
 
      0.640
B7QGF5_IXOSC
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase, putative.
   
 0.569
Your Current Organism:
Ixodes scapularis
NCBI taxonomy Id: 6945
Other names: I. scapularis, Ixodes dammini, Ixodes sp. DNAS-303-249710, black-legged tick, blacklegged tick, deer tick, shoulder tick
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.