STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7QMN0_IXOSCRibosomal biogenesis protein, putative. (246 aa)    
Predicted Functional Partners:
B7QIM1_IXOSC
Uncharacterized protein.
   
 
 0.999
B7PAR7_IXOSC
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.998
B7PEH3_IXOSC
U3 small nucleolar ribonucleoprotein imp4, putative.
   
 
 0.998
B7PXW7_IXOSC
Block of proliferation protein, putative.
   
 
 0.998
ISCW009002
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
 
 0.998
B7Q746_IXOSC
Uncharacterized protein.
   
 
 0.998
B7QG43_IXOSC
Uncharacterized protein.
   
 
 0.998
B7P1K2_IXOSC
Ribosomal biogenesis protein, putative (Fragment).
   
 
 0.997
B7PR80_IXOSC
Uncharacterized protein.
   
 
 0.997
B7QGQ2_IXOSC
mRNA turnover protein 4 mrt4, putative.
   
 
 0.997
Your Current Organism:
Ixodes scapularis
NCBI taxonomy Id: 6945
Other names: I. scapularis, Ixodes dammini, Ixodes sp. DNAS-303-249710, black-legged tick, blacklegged tick, deer tick, shoulder tick
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