Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VP1G_00892Heterokaryon incompatibility protein 6, OR allele. (633 aa)    
Predicted Functional Partners:
VP1G_02855
Uncharacterized protein.
    
  0.514
VP1G_04280
Putative cardiolipin synthase (CMP-forming); Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
  0.514
VP1G_06261
Uncharacterized protein.
    
  0.514
VP1G_07054
Uncharacterized protein.
    
  0.514
VP1G_00071
Uncharacterized protein.
    
  0.503
VP1G_06105
Myosin-2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  0.486
VP1G_06627
Baculoviral IAP repeat-containing protein 5.1.
   
  0.459
VP1G_00244
Centrin-1.
    
  0.454
VP1G_09438
Cytoplasmic dynein 1 intermediate chain 2.
    
  0.440
VP1G_00581
Elongin-C; Belongs to the SKP1 family.
    
  0.439
Your Current Organism:
Valsa mali
NCBI taxonomy Id: 694573
Other names: V. mali var. pyri, Valsa mali var. pyri, Valsa sp. DD-2016
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