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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP1G_00892Heterokaryon incompatibility protein 6, OR allele. (633 aa)    
Predicted Functional Partners:
VP1G_06627
Baculoviral IAP repeat-containing protein 5.1.
   
 0.627
VP1G_06105
Myosin-2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  0.603
VP1G_06024
Ankyrin repeat protein nuc-2.
    
 0.576
VP1G_04049
UBA domain-containing protein 7.
    
  0.539
VP1G_00071
Uncharacterized protein.
    
  0.538
VP1G_00244
Centrin-1.
    
  0.516
VP1G_09234
Glycerophosphodiester phosphodiesterase GDE1.
    
 0.514
VP1G_02240
Cutinase transcription factor 1 alpha.
    
  0.510
VP1G_04139
Cutinase transcription factor 1 beta.
    
  0.510
VP1G_09402
Activator of stress genes 1.
    
  0.510
Your Current Organism:
Valsa mali
NCBI taxonomy Id: 694573
Other names: V. mali var. pyri, Valsa mali var. pyri, Valsa sp. DD-2016
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