STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP1G_01110Uncharacterized membrane protein. (180 aa)    
Predicted Functional Partners:
VP1G_00071
Uncharacterized protein.
    
 0.657
VP1G_05397
Cyclic AMP receptor-like protein A.
    
  0.567
VP1G_09899
Uncharacterized protein.
    
  0.555
VP1G_08709
Damage response protein 1; Belongs to the cytochrome b5 family.
    
 
 0.532
VP1G_03914
Uncharacterized protein.
    
 0.493
VP1G_07473
C-8 sterol isomerase.
   
  
 0.489
VP1G_03354
Uncharacterized protein; Belongs to the OSBP family.
    
  0.484
VP1G_00628
Uncharacterized protein.
    
  0.464
VP1G_01868
Uncharacterized protein.
    
  0.464
VP1G_03406
Annexin A11.
    
  0.464
Your Current Organism:
Valsa mali
NCBI taxonomy Id: 694573
Other names: V. mali var. pyri, Valsa mali var. pyri, Valsa sp. DD-2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.