STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP1G_03175Protein transport protein SSO2. (405 aa)    
Predicted Functional Partners:
VP1G_03408
V-SNARE coiled-coil homology domain-containing protein.
    
 0.979
VP1G_02484
Protein transport protein sec1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.978
VP1G_02649
Uncharacterized protein.
    
 0.964
VP1G_04486
Protein transport protein SEC9.
    
 0.954
VP1G_00749
Vesicular-fusion protein sec18.
    
 0.942
VP1G_00091
Protein transport protein sec22; Belongs to the synaptobrevin family.
    
 0.925
VP1G_04163
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.918
VP1G_04152
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.877
VP1G_04390
Integral membrane protein sed5.
    
 0.855
VP1G_03757
WD_REPEATS_REGION domain-containing protein.
    
 0.847
Your Current Organism:
Valsa mali
NCBI taxonomy Id: 694573
Other names: V. mali var. pyri, Valsa mali var. pyri, Valsa sp. DD-2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.