STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP1G_05507Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating. (375 aa)    
Predicted Functional Partners:
VP1G_04174
Methylsterol monooxygenase; Belongs to the sterol desaturase family.
   
 0.957
VP1G_00504
3-keto-steroid reductase.
   
 0.955
VP1G_07235
Eburicol 14-alpha-demethylase; Belongs to the cytochrome P450 family.
 
 
 0.926
VP1G_04184
Squalene monooxygenase.
   
 
 0.910
VP1G_03129
Putative squalene synthase.
   
 
 0.909
VP1G_01121
Methylsterol monooxygenase 2-2; Belongs to the sterol desaturase family.
   
 0.891
VP1G_02101
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 
 0.882
VP1G_07473
C-8 sterol isomerase.
   
 
 0.874
VP1G_01969
Ergosterol biosynthetic protein 28.
   
 
 0.869
VP1G_05866
Delta(24(24(1)))-sterol reductase.
   
 
 0.869
Your Current Organism:
Valsa mali
NCBI taxonomy Id: 694573
Other names: V. mali var. pyri, Valsa mali var. pyri, Valsa sp. DD-2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.