STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP1G_10304Uncharacterized protein. (345 aa)    
Predicted Functional Partners:
VP1G_04161
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.820
VP1G_00469
Uncharacterized protein.
    
  0.599
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
  0.598
VP1G_03895
Putative 37S ribosomal protein S18, mitochondrial.
    
  0.597
VP1G_07429
40S ribosomal protein S20.
    
  0.596
VP1G_00738
Putative 37S ribosomal protein S28, mitochondrial.
   
  0.594
VP1G_03380
Ribosomal protein S16, mitochondrial.
   
  0.594
VP1G_05216
37S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
    
  0.594
VP1G_06055
37S ribosomal protein MRP17, mitochondrial.
    
  0.594
VP1G_03410
Putative 37S ribosomal protein mrp2, mitochondrial.
    
  0.593
Your Current Organism:
Valsa mali
NCBI taxonomy Id: 694573
Other names: V. mali var. pyri, Valsa mali var. pyri, Valsa sp. DD-2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.