STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRG_15236Uncharacterized protein. (606 aa)    
Predicted Functional Partners:
SPRG_07685
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.938
SPRG_04109
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.752
SPRG_10271
Uncharacterized protein.
   
 
 0.738
SPRG_01652
Ras-like protein Rab-6A.
   
 
 0.645
SPRG_11606
Uncharacterized protein.
      
 0.512
SPRG_10778
Rab-GAP TBC domain-containing protein.
    
 
 0.462
SPRG_07128
N-acetyltransferase domain-containing protein.
      
 0.434
SPRG_03321
Uncharacterized protein.
    
 
 0.426
SPRG_19277
Rab-GAP TBC domain-containing protein.
   
  
 0.418
SPRG_10202
Uncharacterized protein.
   
 
 0.404
Your Current Organism:
Saprolegnia parasitica
NCBI taxonomy Id: 695850
Other names: S. parasitica CBS 223.65, Saprolegnia parasitica CBS 223.65
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