STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRG_08452Fumarate hydratase. (463 aa)    
Predicted Functional Partners:
SPRG_13201
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
 
 0.995
SPRG_14325
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 0.989
SPRG_11501
Uncharacterized protein.
  
 
 0.987
SPRG_09101
Uncharacterized protein; Belongs to the LDH/MDH superfamily.
  
 0.986
SPRG_12496
Malate dehydrogenase.
  
 0.984
SPRG_04463
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.
   
 0.984
SPRG_00887
Malic enzyme.
  
 
 0.978
SPRG_00710
Aspartate aminotransferase.
   
 0.969
SPRG_07018
Malate synthase; Belongs to the malate synthase family.
    
 0.966
SPRG_02338
Malate synthase; Belongs to the malate synthase family.
    
 0.966
Your Current Organism:
Saprolegnia parasitica
NCBI taxonomy Id: 695850
Other names: S. parasitica CBS 223.65, Saprolegnia parasitica CBS 223.65
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