STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRG_06969Histone H2B; Belongs to the histone H2B family. (119 aa)    
Predicted Functional Partners:
SPRG_10121
Histone H2A; Belongs to the histone H2A family.
 
 0.984
SPRG_06968
Histone H2A; Belongs to the histone H2A family.
 
 0.984
SPRG_04128
Histone H2A; Belongs to the histone H2A family.
   
 0.974
SPRG_06033
Uncharacterized protein.
   
 
 0.927
SPRG_05943
Uncharacterized protein.
    
 0.927
SPRG_10100
Histone H3; Belongs to the histone H3 family.
 
 
 0.926
SPRG_05447
RNA polymerase Rpb3/Rpb11 dimeriZation domain-containing protein.
    
 0.926
SPRG_06014
Uncharacterized protein.
    
 0.921
SPRG_08594
Plus3 domain-containing protein.
    
 0.913
SPRG_07858
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.909
Your Current Organism:
Saprolegnia parasitica
NCBI taxonomy Id: 695850
Other names: S. parasitica CBS 223.65, Saprolegnia parasitica CBS 223.65
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.