STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRG_04128Histone H2A; Belongs to the histone H2A family. (142 aa)    
Predicted Functional Partners:
SPRG_05875
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 
 0.991
SPRG_05799
Uncharacterized protein.
    
 
 0.977
SPRG_20323
RuvB-like helicase.
   
 0.976
SPRG_16023
Histone H2B; Belongs to the histone H2B family.
   
 0.974
SPRG_06969
Histone H2B; Belongs to the histone H2B family.
   
 0.974
SPRG_10121
Histone H2A; Belongs to the histone H2A family.
  
0.967
SPRG_06968
Histone H2A; Belongs to the histone H2A family.
  
0.967
SPRG_13358
HIT-type domain-containing protein.
    
 
 0.963
SPRG_04382
Uncharacterized protein; Belongs to the actin family.
   
 
 0.957
SPRG_02263
Uncharacterized protein.
    
 
 0.955
Your Current Organism:
Saprolegnia parasitica
NCBI taxonomy Id: 695850
Other names: S. parasitica CBS 223.65, Saprolegnia parasitica CBS 223.65
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.