STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRG_02892Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (176 aa)    
Predicted Functional Partners:
SPRG_06687
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 
 0.687
SPRG_05163
Ubiquitin-conjugating enzyme E2 4; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.656
SPRG_08616
SKIP_SNW domain-containing protein.
    
 0.638
SPRG_13995
Uncharacterized protein.
    
 0.636
SPRG_19174
Uncharacterized protein.
    
 0.633
SPRG_13736
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.632
SPRG_03685
Uncharacterized protein.
    
 0.623
SPRG_11114
TPR_REGION domain-containing protein.
   
 0.618
SPRG_14366
Uncharacterized protein.
    
 0.604
SPRG_07755
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.589
Your Current Organism:
Saprolegnia parasitica
NCBI taxonomy Id: 695850
Other names: S. parasitica CBS 223.65, Saprolegnia parasitica CBS 223.65
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.