STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB90408.1Diguanylate cyclase (GGDEF) domain-containing protein. (348 aa)    
Predicted Functional Partners:
SMB80192.1
Signal transduction histidine kinase.
  
 0.885
SMB85920.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.838
SMB91363.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
   0.799
SMB94759.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
  
 
  0.797
SMB82956.1
PAS domain S-box-containing protein/HDIG domain-containing protein.
 
 
 0.796
SMB85188.1
PAS domain S-box-containing protein.
 
 
 0.793
SMB97457.1
PAS domain S-box-containing protein.
 
 
 0.792
SMB83201.1
PAS domain S-box-containing protein/HDIG domain-containing protein.
 
 
 0.789
SMB83395.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.734
SMB80264.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
0.725
Your Current Organism:
Deinococcus hopiensis
NCBI taxonomy Id: 695939
Other names: D. hopiensis KR-140, Deinococcus hopiensis DSM 18049, Deinococcus hopiensis KR-140, Deinococcus hopiensis str. KR-140, Deinococcus hopiensis strain KR-140
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.