STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB91475.1Isocitrate dehydrogenase (NADP). (418 aa)    
Predicted Functional Partners:
SMB94136.1
Aconitase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
 
 0.992
SMB95924.1
2-oxoglutarate dehydrogenase E1 component.
   
 
 0.983
SMB80090.1
Glutamate synthase (ferredoxin).
    
 0.962
SMB94443.1
Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.932
SMB94447.1
Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.932
SMB94672.1
Aspartate aminotransferase.
   
 0.925
argH
Argininosuccinate lyase.
     
 0.924
SMB92372.1
L-aspartate oxidase.
     
 0.920
SMB92989.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
  0.919
SMB91045.1
Citrate synthase; Belongs to the citrate synthase family.
 
 
 0.907
Your Current Organism:
Deinococcus hopiensis
NCBI taxonomy Id: 695939
Other names: D. hopiensis KR-140, Deinococcus hopiensis DSM 18049, Deinococcus hopiensis KR-140, Deinococcus hopiensis str. KR-140, Deinococcus hopiensis strain KR-140
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