STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB91878.1Putative ABC transport system permease protein. (389 aa)    
Predicted Functional Partners:
SMB91877.1
Putative ABC transport system ATP-binding protein.
 0.977
SMB77849.1
Putative ABC transport system ATP-binding protein.
 0.937
SMB79187.1
Putative ABC transport system ATP-binding protein.
 0.937
SMB78386.1
Putative ABC transport system ATP-binding protein.
 0.937
SMB81192.1
Putative ABC transport system ATP-binding protein.
 0.928
SMB91897.1
Lipoprotein-releasing system ATP-binding protein.
 0.837
SMB77847.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.707
SMB78385.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.704
SMB79186.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.703
SMB93083.1
Outer membrane lipoprotein-sorting protein.
   
 
 0.669
Your Current Organism:
Deinococcus hopiensis
NCBI taxonomy Id: 695939
Other names: D. hopiensis KR-140, Deinococcus hopiensis DSM 18049, Deinococcus hopiensis KR-140, Deinococcus hopiensis str. KR-140, Deinococcus hopiensis strain KR-140
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.