STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB83033.1Digeranylgeranylglycerophospholipid reductase. (421 aa)    
Predicted Functional Partners:
SMB77770.1
Acyl carrier protein.
  
 0.721
SMB77768.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 
 0.676
SMB93815.1
Electron transfer flavoprotein beta subunit.
  
 
 0.663
SMB79965.1
Magnesium chelatase subunit D.
 
  
 0.605
SMB91221.1
Phytoene synthase.
 
 
 0.604
SMB93812.1
Electron transfer flavoprotein alpha subunit apoprotein.
  
 
 0.594
SMB79972.1
Cobaltochelatase CobN.
   
  
 0.437
SMB94616.1
Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family.
 
 0.431
SMB95167.1
ABC-2 type transport system ATP-binding protein.
  
     0.409
SMB83030.1
N-acetylglucosamine-6-phosphate deacetylase.
       0.403
Your Current Organism:
Deinococcus hopiensis
NCBI taxonomy Id: 695939
Other names: D. hopiensis KR-140, Deinococcus hopiensis DSM 18049, Deinococcus hopiensis KR-140, Deinococcus hopiensis str. KR-140, Deinococcus hopiensis strain KR-140
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.