STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB97717.1lactose/L-arabinose transport system permease protein. (298 aa)    
Predicted Functional Partners:
SMB97716.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.994
SMB97719.1
lactose/L-arabinose transport system permease protein.
  0.986
SMB81497.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.941
SMB93119.1
Arabinogalactan oligomer / maltooligosaccharide transport system permease protein.
 
 0.917
SMB93061.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.906
SMB81486.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.903
SMB97708.1
Ribose transport system ATP-binding protein.
     
  0.900
SMB97710.1
Ribose transport system substrate-binding protein.
     
  0.900
SMB80295.1
Multiple sugar transport system permease protein.
 
   0.880
SMB85100.1
Multiple sugar transport system permease protein.
  
   0.879
Your Current Organism:
Deinococcus hopiensis
NCBI taxonomy Id: 695939
Other names: D. hopiensis KR-140, Deinococcus hopiensis DSM 18049, Deinococcus hopiensis KR-140, Deinococcus hopiensis str. KR-140, Deinococcus hopiensis strain KR-140
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.