STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB97041.12,5-diketo-D-gluconate reductase B. (269 aa)    
Predicted Functional Partners:
SMB77770.1
Acyl carrier protein.
  
 0.902
SMB95180.1
Superoxide dismutase, Cu-Zn family.
  
 0.841
SMB93737.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 0.797
SMB84532.1
Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.734
SMB83329.1
Alcohol dehydrogenase.
  
 
 0.636
SMB80388.1
Catechol 2,3-dioxygenase.
   
 0.614
SMB90641.1
Alcohol dehydrogenase, class IV.
   
 0.609
SMB94066.1
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 0.552
mgsA
Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
     
 0.529
SMB77768.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 0.526
Your Current Organism:
Deinococcus hopiensis
NCBI taxonomy Id: 695939
Other names: D. hopiensis KR-140, Deinococcus hopiensis DSM 18049, Deinococcus hopiensis KR-140, Deinococcus hopiensis str. KR-140, Deinococcus hopiensis strain KR-140
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.