STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BARCL_0178Homologs of previously reported genes of unknown function. (165 aa)    
Predicted Functional Partners:
BARCL_0311
Ubiquinol-cytochrome c reductase cytochrome c1 subunit (fragment).
  
 0.991
cyoB
Cytochrome o ubiquinol oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
  
 0.950
cyoA
Cytochrome o ubiquinol oxidase subunit II.
   
 0.935
BARCL_0363
Processing protease protein; Belongs to the peptidase M16 family.
   
 0.896
cyoC
Cytochrome o ubiquinol oxidase subunit III.
  
 0.884
etfA
Electron transfer flavoprotein alpha-subunit.
   
 
  0.810
tufB
Elongation factor Tu (EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
   0.810
tufB-2
Elongation factor Tu (EF-Tu).
  
   0.810
etfB
Electron transfer flavoprotein beta-subunit.
   
 
  0.809
BARCL_0984
Sco1/2 family protein.
 
  
 0.784
Your Current Organism:
Bartonella clarridgeiae
NCBI taxonomy Id: 696125
Other names: B. clarridgeiae 73, Bartonella clarridgeiae 73, Bartonella clarridgeiae str. 73, Bartonella clarridgeiae strain 73
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.